Sequence Similarity Clusters for the Entities in PDB 1NWD

Entity #1 | Chains: A
Calmodulin protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 131 136 102
95 % 165 173 87
90 % 178 186 87
70 % 180 188 103
50 % 208 221 113
40 % 306 344 38
30 % 333 371 53
Entity #2 | Chains: B,C
Glutamate decarboxylase protein, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50059
95 % 1 1 37443
90 % 1 1 35745
70 % 1 1 31789
50 % 1 1 27206
40 % 1 1 24057
30 % 1 1 20484

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures