Sequence Similarity Clusters for the Entities in PDB 1NWD

Entity #1 | Chains: A
Calmodulin protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 144 149 96
95 % 179 187 82
90 % 192 200 81
70 % 194 202 96
50 % 222 235 105
40 % 320 358 41
30 % 347 385 50
Entity #2 | Chains: B,C
Glutamate decarboxylase protein, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51043
95 % 1 1 38140
90 % 1 1 36385
70 % 1 1 32340
50 % 1 1 27639
40 % 1 1 24446
30 % 1 1 20799

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures