Sequence Similarity Clusters for the Entities in PDB 1NW9

Entity #1 | Chains: A
Baculoviral IAP repeat-containing protein 4 protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 26 780
95 % 12 29 656 Flexibility: Low
Max RMSD: 6.4, Avg RMSD: 1.4
PDBFlex
90 % 12 29 678
70 % 13 31 598
50 % 19 37 584
40 % 41 61 402
30 % 43 67 333
Entity #2 | Chains: B
caspase 9, apoptosis-related cysteine protease protein, length: 277 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 5027
95 % 1 4 3916 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 2.0
PDBFlex
90 % 1 4 3975
70 % 1 4 3899
50 % 1 4 3797
40 % 1 4 3608
30 % 80 113 244

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures