Sequence Similarity Clusters for the Entities in PDB 1NW9

Entity #1 | Chains: A
Baculoviral IAP repeat-containing protein 4 protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 26 656
95 % 12 29 606
90 % 12 29 635
70 % 13 31 555
50 % 15 33 571
40 % 37 57 357
30 % 38 58 342
Entity #2 | Chains: B
caspase 9, apoptosis-related cysteine protease protein, length: 277 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 4119
95 % 1 4 3617 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 2.0
PDBFlex
90 % 1 4 3670
70 % 1 4 3611
50 % 1 4 3523
40 % 1 4 3402
30 % 80 111 216

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.