Sequence Similarity Clusters for the Entities in PDB 1NW9

Entity #1 | Chains: A
Baculoviral IAP repeat-containing protein 4 protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 26 688
95 % 12 29 641
90 % 12 29 667
70 % 13 31 583
50 % 15 33 601
40 % 37 57 394
30 % 38 58 381
Entity #2 | Chains: B
caspase 9, apoptosis-related cysteine protease protein, length: 277 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 4365
95 % 1 4 3783
90 % 1 4 3836
70 % 1 4 3776
50 % 1 4 3664
40 % 1 4 3531
30 % 80 112 223

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures