Sequence Similarity Clusters for the Entities in PDB 1NVX

Entity #1 | Chains: Q,R
Transforming protein p21/H-RAS-1 protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 76 80 393
95 % 140 151 213 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.5
PDBFlex
90 % 220 234 79
70 % 222 236 94
50 % 266 284 97
40 % 432 476 22
30 % 721 821 13
Entity #2 | Chains: S
Son of sevenless protein homolog 1 protein, length: 481 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 19 19 3045
95 % 19 19 3342 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.2
PDBFlex
90 % 19 19 3400
70 % 19 19 3353
50 % 19 19 3270
40 % 19 19 3153
30 % 19 19 2935

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures