Sequence Similarity Clusters for the Entities in PDB 1NVW

Entity #1 | Chains: Q,R
Transforming protein p21/H-RAS-1 protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 49 58 575
95 % 120 145 221 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.5
PDBFlex
90 % 175 205 115
70 % 177 207 126
50 % 210 253 115
40 % 345 439 26
30 % 572 771 16
Entity #2 | Chains: S
Son of sevenless protein homolog 1 protein, length: 481 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 19 2547
95 % 14 19 3170 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.3
PDBFlex
90 % 14 19 3216
70 % 14 19 3183
50 % 14 19 3110
40 % 14 19 3039
30 % 14 19 2842

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.