Sequence Similarity Clusters for the Entities in PDB 1NVV

Entity #1 | Chains: Q
Transforming protein p21/H-RAS-1 protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 15115
95 % 97 145 219 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.6
PDBFlex
90 % 146 200 121
70 % 148 202 136
50 % 175 248 122
40 % 275 434 26
30 % 424 765 16
Entity #2 | Chains: R
Transforming protein p21/H-RAS-1 protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 39 58 572
95 % 98 145 219 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.6
PDBFlex
90 % 147 200 121
70 % 149 202 136
50 % 176 248 122
40 % 276 434 26
30 % 425 765 16
Entity #3 | Chains: S
Son of sevenless protein homolog 1 protein, length: 481 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 19 2529
95 % 5 19 3147 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.2
PDBFlex
90 % 5 19 3193
70 % 5 19 3162
50 % 5 19 3091
40 % 5 19 3014
30 % 5 19 2821

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.