Sequence Similarity Clusters for the Entities in PDB 1NVV

Entity #1 | Chains: Q
Transforming protein p21/H-RAS-1 protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 15583
95 % 98 150 211 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.5
PDBFlex
90 % 151 211 97
70 % 153 213 111
50 % 180 261 108
40 % 282 451 21
30 % 433 782 16
Entity #2 | Chains: R
Transforming protein p21/H-RAS-1 protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 39 60 496
95 % 99 150 211 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.5
PDBFlex
90 % 152 211 97
70 % 154 213 111
50 % 181 261 108
40 % 283 451 21
30 % 434 782 16
Entity #3 | Chains: S
Son of sevenless protein homolog 1 protein, length: 481 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 19 2616
95 % 5 19 3244 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.2
PDBFlex
90 % 5 19 3291
70 % 5 19 3252
50 % 5 19 3175
40 % 5 19 3097
30 % 5 19 2900

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.