Sequence Similarity Clusters for the Entities in PDB 1NVU

Entity #1 | Chains: Q,R
Transforming protein p21/H-RAS-1 protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 13238
95 % 88 147 213 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.5
PDBFlex
90 % 139 207 112
70 % 141 209 124
50 % 167 257 109
40 % 254 444 22
30 % 382 775 16
Entity #2 | Chains: S
Son of sevenless protein homolog 1 protein, length: 481 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 2581
95 % 3 19 3211 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.2
PDBFlex
90 % 3 19 3255
70 % 3 19 3226
50 % 3 19 3155
40 % 3 19 3078
30 % 3 19 2881

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.