Sequence Similarity Clusters for the Entities in PDB 1NVU

Entity #1 | Chains: Q,R
Transforming protein p21/H-RAS-1 protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 13419
95 % 89 150 214 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.5
PDBFlex
90 % 149 221 86
70 % 151 223 102
50 % 177 272 103
40 % 266 462 21
30 % 397 797 16
Entity #2 | Chains: S
Son of sevenless protein homolog 1 protein, length: 481 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 19 2646
95 % 3 19 3271 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.2
PDBFlex
90 % 3 19 3318
70 % 3 19 3279
50 % 3 19 3195
40 % 3 19 3113
30 % 3 19 2914

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures