Sequence Similarity Clusters for the Entities in PDB 1NVT

Entity #1 | Chains: A,B
Shikimate 5'-dehydrogenase protein, length: 287 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38556
95 % 1 1 32655 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.4
PDBFlex
90 % 1 1 31267
70 % 1 1 26944
50 % 1 1 23065
40 % 10 11 2221
30 % 43 49 535

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures