Sequence Similarity Clusters for the Entities in PDB 1NVT

Entity #1 | Chains: A,B
Shikimate 5'-dehydrogenase protein, length: 287 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38332
95 % 1 1 29905 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.4
PDBFlex
90 % 1 1 28843
70 % 1 1 26004
50 % 1 1 22257
40 % 10 11 2193
30 % 43 49 512

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures