Sequence Similarity Clusters for the Entities in PDB 1NVS

Entity #1 | Chains: A
Serine/threonine-protein kinase Chk1 protein, length: 289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 34 103 338
95 % 50 122 336 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.9
PDBFlex
90 % 56 132 313
70 % 56 132 360
50 % 56 132 435
40 % 56 132 468
30 % 1240 4588 2
Entity #2 | Chains: B
Peptide ASVSA protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures