Sequence Similarity Clusters for the Entities in PDB 1NVS

Entity #1 | Chains: A
Serine/threonine-protein kinase Chk1 protein, length: 289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 34 103 308
95 % 50 122 322 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.9
PDBFlex
90 % 56 132 299
70 % 56 132 343
50 % 56 132 416
40 % 56 132 440
30 % 1149 4356 2
Entity #2 | Chains: B
Peptide ASVSA protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures