Sequence Similarity Clusters for the Entities in PDB 1NVQ

Entity #1 | Chains: A
Serine/threonine-protein kinase Chk1 protein, length: 289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 45 101 268
95 % 71 129 281 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.7
PDBFlex
90 % 71 129 295
70 % 71 129 341
50 % 71 129 401
40 % 71 129 426
30 % 1375 3924 2
Entity #2 | Chains: B
Peptide ASVSA protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures