Sequence Similarity Clusters for the Entities in PDB 1NVM

Entity #1 | Chains: A,C,E,G
4-hydroxy-2-oxovalerate aldolase protein, length: 345 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 17787
95 % 1 1 15962
90 % 1 1 15647
70 % 1 1 14593
50 % 3 4 6464
40 % 3 4 6016
30 % 3 4 5381
Entity #2 | Chains: B,D,F,H
acetaldehyde dehydrogenase (acylating) protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 18283
95 % 1 1 16293
90 % 1 1 15966
70 % 1 1 14868
50 % 3 4 6497
40 % 3 4 6046
30 % 3 4 5408

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.