Sequence Similarity Clusters for the Entities in PDB 1NVI

Entity #1 | Chains: D
Molybdopterin converting factor subunit 1 protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 72669
95 % 4 7 11081 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.2
PDBFlex
90 % 4 7 10938
70 % 4 7 10377
50 % 4 7 9390
40 % 4 7 8590
30 % 4 7 7556
Entity #2 | Chains: E
Molybdopterin converting factor subunit 2 protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 6790
95 % 3 5 7379 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 3 5 7341
70 % 3 5 7137
50 % 3 5 6585
40 % 3 5 6137
30 % 3 7 3817

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures