Sequence Similarity Clusters for the Entities in PDB 1NVI

Entity #1 | Chains: D
Molybdopterin converting factor subunit 1 protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 73583
95 % 4 7 11265 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.2
PDBFlex
90 % 4 7 11121
70 % 4 7 10542
50 % 4 7 9528
40 % 4 7 8710
30 % 4 7 7658
Entity #2 | Chains: E
Molybdopterin converting factor subunit 2 protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 6899
95 % 3 5 7489 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 3 5 7452
70 % 3 5 7242
50 % 3 5 6685
40 % 3 5 6230
30 % 3 7 3868

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures