Sequence Similarity Clusters for the Entities in PDB 1NVF

Entity #1 | Chains: A,B,C
3-DEHYDROQUINATE SYNTHASE protein, length: 393 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 10 2608
95 % 7 10 2903 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.2
PDBFlex
90 % 7 10 2961
70 % 7 10 2926
50 % 8 11 2620
40 % 8 11 2573
30 % 24 28 1089

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures