Sequence Similarity Clusters for the Entities in PDB 1NVF

Entity #1 | Chains: A,B,C
3-DEHYDROQUINATE SYNTHASE protein, length: 393 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 10 2526
95 % 7 10 2821 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.2
PDBFlex
90 % 7 10 2882
70 % 7 10 2846
50 % 8 11 2552
40 % 8 11 2507
30 % 24 28 1062

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures