Sequence Similarity Clusters for the Entities in PDB 1NUB

Entity #1 | Chains: A,B
BASEMENT MEMBRANE PROTEIN BM-40 protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39323
95 % 1 3 14196 Flexibility: Medium
Max RMSD: 4.7, Avg RMSD: 3.0
PDBFlex
90 % 1 3 13965
70 % 1 3 13138
50 % 1 3 11682
40 % 1 3 10590
30 % 1 3 9204

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.