Sequence Similarity Clusters for the Entities in PDB 1NU9

Entity #1 | Chains: A,D
Thrombin light and heavy chains protein, length: 291 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 21 2127
95 % 290 374 35 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.6
PDBFlex
90 % 293 381 38
70 % 302 405 45
50 % 302 405 80
40 % 1355 1685 4
30 % 1462 1834 6
Entity #2 | Chains: C,F
Staphylocoagulase protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 19569
95 % 2 2 17325 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 2.0
PDBFlex
90 % 2 2 16973
70 % 2 2 15789
50 % 2 2 13805
40 % 2 2 12372
30 % 2 2 10626

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.