Sequence Similarity Clusters for the Entities in PDB 1NU9

Entity #1 | Chains: A,D
Thrombin light and heavy chains protein, length: 291 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 21 2202
95 % 292 377 35
90 % 295 384 39
70 % 304 408 46
50 % 304 408 84
40 % 1380 1719 4
30 % 1487 1869 6
Entity #2 | Chains: C,F
Staphylocoagulase protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 20046
95 % 2 2 17696
90 % 2 2 17344
70 % 2 2 16125
50 % 2 2 14088
40 % 2 2 12617
30 % 2 2 10845

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures