Sequence Similarity Clusters for the Entities in PDB 1NU1

Entity #1 | Chains: A
Ubiquinol-cytochrome C reductase complex core protein I, mitochondrial protein, length: 446 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 22 1282
95 % 16 27 1297
90 % 16 27 1321
70 % 21 44 665
50 % 21 44 720
40 % 21 44 759
30 % 28 52 650
Entity #10 | Chains: J
Ubiquinol-cytochrome C reductase complex 7.2 kDa protein protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 25 993
95 % 16 29 1230
90 % 16 29 1256
70 % 21 43 689
50 % 21 43 740
40 % 21 43 771
30 % 21 43 775
Entity #11 | Chains: K
Ubiquinol-cytochrome C reductase complex 6.4 kDa protein protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 8 5302
95 % 13 20 2081
90 % 13 20 2140
70 % 13 20 2142
50 % 13 20 2125
40 % 13 20 2122
30 % 13 20 2027
Entity #2 | Chains: B
Ubiquinol-cytochrome C reductase complex core protein 2, mitochondrial protein, length: 439 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 23 1283
95 % 16 28 1298
90 % 16 31 1213
70 % 21 45 666
50 % 21 45 721
40 % 21 45 760
30 % 21 45 765
Entity #3 | Chains: C
Cytochrome b protein, length: 379 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 23 1173
95 % 16 23 1611
90 % 16 26 1323
70 % 21 43 667
50 % 28 51 603
40 % 33 59 439
30 % 33 59 430
Entity #4 | Chains: D
cytochrome c1 protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 24 1033
95 % 16 27 1305
90 % 16 27 1332
70 % 21 41 716
50 % 28 49 632
40 % 28 49 675
30 % 33 57 447
Entity #5 | Chains: E
UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT, mitochondrial protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 21 1456
95 % 16 24 1500
90 % 16 27 1395
70 % 21 41 732
50 % 28 49 643
40 % 33 57 451
30 % 33 57 454
Entity #6 | Chains: F
Ubiquinol-cytochrome C reductase complex 14 kDa protein protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 21 1309
95 % 16 26 1313
90 % 16 29 1251
70 % 21 43 684
50 % 21 43 735
40 % 21 43 766
30 % 21 43 770
Entity #7 | Chains: G
Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 22 1270
95 % 16 26 1317
90 % 16 29 1254
70 % 16 29 1284
50 % 21 43 739
40 % 21 43 770
30 % 21 43 774
Entity #8 | Chains: H
Ubiquinol-cytochrome C reductase complex 11 kDa protein protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 20 1558
95 % 16 23 1802
90 % 21 37 821
70 % 21 39 788
50 % 21 39 833
40 % 21 39 856
30 % 21 39 851
Entity #9 | Chains: I
Ubiquinol-cytochrome C reductase 8 kDa protein protein, length: 57 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 7 6183
95 % 4 7 6722
90 % 4 7 6703
70 % 4 7 6534
50 % 4 7 6057
40 % 4 7 5668
30 % 4 7 5077

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.