Sequence Similarity Clusters for the Entities in PDB 1NU1

Entity #1 | Chains: A
Ubiquinol-cytochrome C reductase complex core protein I, mitochondrial protein, length: 446 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 22 1344
95 % 16 27 1339
90 % 16 27 1361
70 % 21 44 709
50 % 21 44 759
40 % 21 44 800
30 % 28 52 665
Entity #10 | Chains: J
Ubiquinol-cytochrome C reductase complex 7.2 kDa protein protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 25 1041
95 % 16 29 1272
90 % 16 29 1296
70 % 21 43 732
50 % 21 43 782
40 % 21 43 814
30 % 21 43 807
Entity #11 | Chains: K
Ubiquinol-cytochrome C reductase complex 6.4 kDa protein protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 8 5477
95 % 13 20 2149
90 % 13 20 2217
70 % 13 20 2220
50 % 13 20 2190
40 % 13 20 2186
30 % 13 20 2086
Entity #2 | Chains: B
Ubiquinol-cytochrome C reductase complex core protein 2, mitochondrial protein, length: 439 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 23 1345
95 % 16 28 1340
90 % 16 31 1253
70 % 21 45 710
50 % 21 45 760
40 % 21 45 801
30 % 21 45 796
Entity #3 | Chains: C
Cytochrome b protein, length: 379 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 23 1224
95 % 16 23 1668
90 % 16 26 1363
70 % 21 43 711
50 % 28 51 631
40 % 33 59 467
30 % 33 59 461
Entity #4 | Chains: D
cytochrome c1 protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 24 1089
95 % 16 27 1345
90 % 16 27 1368
70 % 21 41 769
50 % 28 49 657
40 % 28 49 696
30 % 33 57 478
Entity #5 | Chains: E
UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT, mitochondrial protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 21 1516
95 % 16 24 1554
90 % 16 27 1439
70 % 21 41 793
50 % 28 49 673
40 % 33 57 483
30 % 33 57 482
Entity #6 | Chains: F
Ubiquinol-cytochrome C reductase complex 14 kDa protein protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 21 1371
95 % 16 26 1354
90 % 16 29 1291
70 % 21 43 725
50 % 21 43 774
40 % 21 43 808
30 % 21 43 801
Entity #7 | Chains: G
Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 22 1333
95 % 16 26 1358
90 % 16 29 1295
70 % 16 29 1328
50 % 21 43 778
40 % 21 43 812
30 % 21 43 805
Entity #8 | Chains: H
Ubiquinol-cytochrome C reductase complex 11 kDa protein protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 20 1619
95 % 16 23 1863
90 % 21 37 871
70 % 21 39 844
50 % 21 39 882
40 % 21 39 907
30 % 21 39 888
Entity #9 | Chains: I
Ubiquinol-cytochrome C reductase 8 kDa protein protein, length: 57 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 7 6375
95 % 4 7 6908
90 % 4 7 6874
70 % 4 7 6691
50 % 4 7 6195
40 % 4 7 5781
30 % 4 7 5172

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.