Sequence Similarity Clusters for the Entities in PDB 1NU1

Entity #1 | Chains: A
Ubiquinol-cytochrome C reductase complex core protein I, mitochondrial protein, length: 446 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 24 1195
95 % 16 29 1258
90 % 16 33 1050
70 % 21 50 626
50 % 21 50 670
40 % 21 50 702
30 % 28 58 592
Entity #10 | Chains: J
Ubiquinol-cytochrome C reductase complex 7.2 kDa protein protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 27 970
95 % 16 32 1115
90 % 16 32 1140
70 % 21 49 642
50 % 21 49 686
40 % 21 49 715
30 % 21 49 713
Entity #11 | Chains: K
Ubiquinol-cytochrome C reductase complex 6.4 kDa protein protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 8 5792
95 % 13 21 2107
90 % 13 22 1951
70 % 13 25 1544
50 % 13 25 1587
40 % 13 25 1607
30 % 13 25 1580
Entity #2 | Chains: B
Ubiquinol-cytochrome C reductase complex core protein 2, mitochondrial protein, length: 439 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 25 1196
95 % 16 30 1259
90 % 16 34 1121
70 % 21 51 627
50 % 21 51 671
40 % 21 51 703
30 % 21 51 701
Entity #3 | Chains: C
Cytochrome b protein, length: 379 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 25 1121
95 % 16 25 1523
90 % 16 29 1210
70 % 21 49 629
50 % 28 57 563
40 % 33 65 444
30 % 33 65 444
Entity #4 | Chains: D
cytochrome c1 protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 26 1006
95 % 16 29 1268
90 % 16 32 1104
70 % 21 46 678
50 % 28 54 609
40 % 28 54 641
30 % 33 62 462
Entity #5 | Chains: E
UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT, mitochondrial protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 21 1615
95 % 16 24 1634
90 % 16 30 1262
70 % 21 44 742
50 % 28 52 656
40 % 33 60 484
30 % 33 60 482
Entity #6 | Chains: F
Ubiquinol-cytochrome C reductase complex 14 kDa protein protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 22 1317
95 % 16 29 1192
90 % 16 32 1137
70 % 21 49 640
50 % 21 49 681
40 % 21 49 710
30 % 21 49 710
Entity #7 | Chains: G
Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 24 1184
95 % 16 29 1194
90 % 16 32 1139
70 % 16 35 1048
50 % 21 49 685
40 % 21 49 714
30 % 21 49 712
Entity #8 | Chains: H
Ubiquinol-cytochrome C reductase complex 11 kDa protein protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 21 1583
95 % 16 30 1195
90 % 21 44 684
70 % 21 48 650
50 % 21 48 693
40 % 21 48 725
30 % 21 48 721
Entity #9 | Chains: I
Ubiquinol-cytochrome C reductase 8 kDa protein protein, length: 57 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 7 6753
95 % 4 7 7318
90 % 4 7 7271
70 % 4 10 4171
50 % 4 10 4016
40 % 4 10 3842
30 % 4 10 3559

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.