Sequence Similarity Clusters for the Entities in PDB 1NU1

Entity #1 | Chains: A
Ubiquinol-cytochrome C reductase complex core protein I, mitochondrial protein, length: 446 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 22 1324
95 % 16 27 1323
90 % 16 27 1348
70 % 21 44 691
50 % 21 44 740
40 % 21 44 781
30 % 28 52 660
Entity #10 | Chains: J
Ubiquinol-cytochrome C reductase complex 7.2 kDa protein protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 25 1026
95 % 16 29 1254
90 % 16 29 1282
70 % 21 43 715
50 % 21 43 764
40 % 21 43 796
30 % 21 43 793
Entity #11 | Chains: K
Ubiquinol-cytochrome C reductase complex 6.4 kDa protein protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 8 5404
95 % 13 20 2124
90 % 13 20 2190
70 % 13 20 2197
50 % 13 20 2173
40 % 13 20 2169
30 % 13 20 2072
Entity #2 | Chains: B
Ubiquinol-cytochrome C reductase complex core protein 2, mitochondrial protein, length: 439 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 23 1325
95 % 16 28 1324
90 % 16 31 1237
70 % 21 45 692
50 % 21 45 741
40 % 21 45 782
30 % 21 45 780
Entity #3 | Chains: C
Cytochrome b protein, length: 379 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 23 1206
95 % 16 23 1652
90 % 16 26 1350
70 % 21 43 693
50 % 28 51 623
40 % 33 59 464
30 % 33 59 458
Entity #4 | Chains: D
cytochrome c1 protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 24 1070
95 % 16 27 1330
90 % 16 27 1356
70 % 21 41 746
50 % 28 49 649
40 % 28 49 689
30 % 33 57 472
Entity #5 | Chains: E
UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT, mitochondrial protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 21 1495
95 % 16 24 1535
90 % 16 27 1425
70 % 21 41 768
50 % 28 49 662
40 % 33 57 477
30 % 33 57 478
Entity #6 | Chains: F
Ubiquinol-cytochrome C reductase complex 14 kDa protein protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 21 1351
95 % 16 26 1339
90 % 16 29 1277
70 % 21 43 708
50 % 21 43 757
40 % 21 43 789
30 % 21 43 786
Entity #7 | Chains: G
Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 22 1313
95 % 16 26 1343
90 % 16 29 1281
70 % 16 29 1316
50 % 21 43 761
40 % 21 43 793
30 % 21 43 790
Entity #8 | Chains: H
Ubiquinol-cytochrome C reductase complex 11 kDa protein protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 20 1599
95 % 16 23 1840
90 % 21 37 849
70 % 21 39 821
50 % 21 39 865
40 % 21 39 890
30 % 21 39 875
Entity #9 | Chains: I
Ubiquinol-cytochrome C reductase 8 kDa protein protein, length: 57 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 7 6309
95 % 4 7 6843
90 % 4 7 6814
70 % 4 7 6642
50 % 4 7 6150
40 % 4 7 5745
30 % 4 7 5141

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.