Sequence Similarity Clusters for the Entities in PDB 1NTK

Entity #1 | Chains: A
Ubiquinol-cytochrome C reductase complex core protein I, mitochondrial protein, length: 446 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 22 1320
95 % 7 27 1320
90 % 7 27 1345
70 % 7 44 691
50 % 7 44 740
40 % 7 44 780
30 % 13 52 658
Entity #10 | Chains: J
Ubiquinol-cytochrome C reductase complex 7.2 kDa protein protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 25 1021
95 % 7 29 1250
90 % 7 29 1278
70 % 7 43 715
50 % 7 43 763
40 % 7 43 794
30 % 7 43 792
Entity #11 | Chains: K
Ubiquinol-cytochrome C reductase complex 6.4 kDa protein protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 8 5398
95 % 4 20 2121
90 % 4 20 2188
70 % 4 20 2194
50 % 4 20 2171
40 % 4 20 2166
30 % 4 20 2071
Entity #2 | Chains: B
Ubiquinol-cytochrome C reductase complex core protein 2, mitochondrial protein, length: 439 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 23 1321
95 % 7 28 1321
90 % 7 31 1233
70 % 7 45 692
50 % 7 45 741
40 % 7 45 781
30 % 7 45 779
Entity #3 | Chains: C
Cytochrome b protein, length: 379 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 23 1203
95 % 7 23 1647
90 % 7 26 1347
70 % 7 43 693
50 % 13 51 622
40 % 14 59 463
30 % 14 59 457
Entity #4 | Chains: D
cytochrome c1 protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 24 1065
95 % 7 27 1326
90 % 7 27 1352
70 % 7 41 745
50 % 13 49 649
40 % 13 49 689
30 % 14 57 472
Entity #5 | Chains: E
UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT, MITOCHONDRIAL protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 21 1492
95 % 7 24 1531
90 % 7 27 1421
70 % 7 41 767
50 % 13 49 662
40 % 14 57 477
30 % 14 57 478
Entity #6 | Chains: F
Ubiquinol-cytochrome C reductase complex 14 kDa protein protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 21 1348
95 % 7 26 1335
90 % 7 29 1273
70 % 7 43 708
50 % 7 43 756
40 % 7 43 787
30 % 7 43 785
Entity #7 | Chains: G
Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 22 1309
95 % 7 26 1339
90 % 7 29 1277
70 % 7 29 1312
50 % 7 43 760
40 % 7 43 791
30 % 7 43 789
Entity #8 | Chains: H
Ubiquinol-cytochrome C reductase complex 11 kDa protein protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 20 1596
95 % 7 23 1838
90 % 7 37 847
70 % 7 39 817
50 % 7 39 860
40 % 7 39 886
30 % 7 39 873
Entity #9 | Chains: I
Ubiquinol-cytochrome C reductase 8 kDa protein protein, length: 57 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 7 6303
95 % 2 7 6837
90 % 2 7 6811
70 % 2 7 6638
50 % 2 7 6145
40 % 2 7 5741
30 % 2 7 5138

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.