Sequence Similarity Clusters for the Entities in PDB 1NS3

Entity #1 | Chains: A,B
NS3 PROTEASE protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 5566
95 % 18 25 700 Flexibility: Low
Max RMSD: 8.3, Avg RMSD: 1.3
PDBFlex
90 % 18 25 730
70 % 78 89 222
50 % 78 89 250
40 % 78 89 267
30 % 78 89 277
Entity #2 | Chains: C,D
NS4A PEPTIDE protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.