Sequence Similarity Clusters for the Entities in PDB 1NRS

Entity #1 | Chains: L
ALPHA-THROMBIN (SMALL SUBUNIT) protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 231 335 45
95 % 231 336 60
90 % 231 336 65
70 % 231 338 76
50 % 231 338 101
40 % 231 338 125
30 % 231 338 137
Entity #2 | Chains: H
ALPHA-THROMBIN (LARGE SUBUNIT) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 205 290 55
95 % 255 374 35
90 % 257 381 38
70 % 259 405 44
50 % 259 405 78
40 % 1220 1684 4
30 % 1313 1833 6
Entity #3 | Chains: R
RECEPTOR BASED PEPTIDE NRP protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: I
HIRUGEN protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.