Sequence Similarity Clusters for the Entities in PDB 1NRQ

Entity #1 | Chains: L
ALPHA-THROMBIN (SMALL SUBUNIT) protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 321 328 42
95 % 322 329 57
90 % 322 329 62
70 % 324 331 71
50 % 324 331 95
40 % 324 331 120
30 % 324 331 132
Entity #2 | Chains: H
ALPHA-THROMBIN (LARGE SUBUNIT) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 277 283 51
95 % 360 367 33
90 % 366 374 35
70 % 389 398 40
50 % 389 398 70
40 % 1582 1605 4
30 % 1720 1747 6
Entity #3 | Chains: R
RECEPTOR BASED PEPTIDE D-FPR'S protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69444
95 % 3 3 22941
90 % 3 3 22214
70 % 3 3 20336
50 % 3 3 17696
40 % 3 3 15772
30 % 3 3 13532

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.