Sequence Similarity Clusters for the Entities in PDB 1NRP

Entity #1 | Chains: L
ALPHA-THROMBIN (SMALL SUBUNIT) protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 312 328 43
95 % 313 329 58
90 % 313 329 63
70 % 314 331 74
50 % 314 331 100
40 % 314 331 124
30 % 314 331 135
Entity #2 | Chains: H
ALPHA-THROMBIN (LARGE SUBUNIT) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 271 283 53
95 % 349 367 35
90 % 354 374 36
70 % 372 398 41
50 % 372 398 75
40 % 1541 1617 4
30 % 1671 1759 6
Entity #3 | Chains: R
RECEPTOR BASED PEPTIDE NR'S protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 46695
95 % 2 3 23580
90 % 2 3 22825
70 % 2 3 20888
50 % 2 3 18161
40 % 2 3 16180
30 % 2 3 13897

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.