Sequence Similarity Clusters for the Entities in PDB 1NRO

Entity #1 | Chains: L
ALPHA-THROMBIN (SMALL SUBUNIT) protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 306 328 42
95 % 307 329 57
90 % 307 329 62
70 % 308 331 71
50 % 308 331 95
40 % 308 331 120
30 % 308 331 132
Entity #2 | Chains: H
ALPHA-THROMBIN (LARGE SUBUNIT) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 265 283 51
95 % 342 367 33
90 % 347 374 35
70 % 364 398 40
50 % 364 398 70
40 % 1488 1605 4
30 % 1614 1747 6
Entity #3 | Chains: R
RECEPTOR BASED PEPTIDE NRP protein, length: 27 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69125
95 % 1 1 48209
90 % 1 1 45863
70 % 1 1 40398
50 % 1 1 34611
40 % 1 1 30547
30 % 1 1 25902

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.