Sequence Similarity Clusters for the Entities in PDB 1NRN

Entity #1 | Chains: L
ALPHA-THROMBIN (SMALL SUBUNIT) protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 310 328 43
95 % 311 329 58
90 % 311 329 63
70 % 312 331 72
50 % 312 331 96
40 % 312 331 120
30 % 312 331 133
Entity #2 | Chains: H
ALPHA-THROMBIN (LARGE SUBUNIT) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 269 283 52
95 % 346 367 34
90 % 351 374 36
70 % 369 398 40
50 % 369 398 74
40 % 1506 1606 4
30 % 1636 1748 6
Entity #3 | Chains: R
RECEPTOR BASED PEPTIDE NRS protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 45967
95 % 1 3 23196
90 % 1 3 22459
70 % 1 3 20558
50 % 1 3 17885
40 % 1 3 15931
30 % 1 3 13670

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.