Sequence Similarity Clusters for the Entities in PDB 1NRL

Entity #1 | Chains: A,B
Orphan nuclear receptor PXR protein, length: 316 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 18 1742
95 % 3 21 1767 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.9
PDBFlex
90 % 3 21 1802
70 % 3 21 1823
50 % 3 21 1848
40 % 3 21 1858
30 % 4 48 973
Entity #2 | Chains: C,D
Nuclear Receptor Coactivator 1 isoform 3 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 19 1123
95 % 6 19 1531
90 % 6 19 1561
70 % 6 19 1559
50 % 6 19 1599
40 % 6 19 1621
30 % 6 19 1591

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.