Sequence Similarity Clusters for the Entities in PDB 1NRJ

Entity #1 | Chains: A
Signal recognition particle receptor alpha subunit homolog protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59967
95 % 1 1 43712
90 % 1 1 41565
70 % 1 1 36650
50 % 1 1 31095
40 % 1 1 27233
30 % 1 1 22752
Entity #2 | Chains: B
Signal recognition particle receptor beta subunit protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53084
95 % 1 1 43711
90 % 1 1 41564
70 % 1 1 36649
50 % 1 1 31094
40 % 1 1 27232
30 % 1 4 11545

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1NRJ 2 B Signal recognition particle receptor beta subunit residues 31-244 4932
2 2FH5 2 B Signal recognition particle receptor beta subunit residues 63-269 10090
3 6FRK 54 v SRP receptor beta subunit 9986
4 2GO5 6 2 Signal recognition particle receptor beta subunit (SR b) 10090