Sequence Similarity Clusters for the Entities in PDB 1NRJ

Entity #1 | Chains: A
Signal recognition particle receptor alpha subunit homolog protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61144
95 % 1 1 44636
90 % 1 1 42424
70 % 1 1 37347
50 % 1 1 31710
40 % 1 1 27783
30 % 1 1 23216
Entity #2 | Chains: B
Signal recognition particle receptor beta subunit protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54175
95 % 1 1 44635
90 % 1 1 42423
70 % 1 1 37346
50 % 1 1 31709
40 % 1 1 27782
30 % 1 4 11758

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1NRJ 2 B Signal recognition particle receptor beta subunit residues 31-244 4932
2 2FH5 2 B Signal recognition particle receptor beta subunit residues 63-269 10090
3 6FRK 54 v SRP receptor beta subunit 9986
4 2GO5 6 2 Signal recognition particle receptor beta subunit (SR b) 10090