Sequence Similarity Clusters for the Entities in PDB 1NRJ

Entity #1 | Chains: A
Signal recognition particle receptor alpha subunit homolog protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58903
95 % 1 1 42980
90 % 1 1 40925
70 % 1 1 36104
50 % 1 1 30645
40 % 1 1 26855
30 % 1 1 22421
Entity #2 | Chains: B
Signal recognition particle receptor beta subunit protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58893
95 % 1 1 42979
90 % 1 1 40924
70 % 1 1 36103
50 % 1 1 30644
40 % 1 1 26854
30 % 1 4 11300

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1NRJ 2 B Signal recognition particle receptor beta subunit residues 31-244 4932
2 2FH5 2 B Signal recognition particle receptor beta subunit residues 63-269 10090
3 6FRK 54 v SRP receptor beta subunit 9986
4 2GO5 6 2 Signal recognition particle receptor beta subunit (SR b) 10090