Sequence Similarity Clusters for the Entities in PDB 1NQP

Entity #1 | Chains: A,C
Hemoglobin alpha chain protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 33 208 26
95 % 38 239 33
90 % 39 240 34
70 % 49 321 17
50 % 119 726 4
40 % 120 731 8
30 % 358 1170 8
Entity #2 | Chains: B,D
Hemoglobin beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 10042
95 % 38 239 31
90 % 39 244 30
70 % 50 335 14
50 % 120 726 4
40 % 121 731 8
30 % 359 1170 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.