Sequence Similarity Clusters for the Entities in PDB 1NQM

Entity #1 | Chains: A,B,C,D
Streptavidin protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23069
95 % 98 144 71 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.3
PDBFlex
90 % 101 147 72
70 % 101 147 86
50 % 101 148 114
40 % 101 148 137
30 % 125 202 95

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.