Sequence Similarity Clusters for the Entities in PDB 1NQM

Entity #1 | Chains: A,B,C,D
Streptavidin protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23617
95 % 98 144 74 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.3
PDBFlex
90 % 101 147 73
70 % 101 147 92
50 % 101 148 118
40 % 101 148 142
30 % 125 203 100

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures