Sequence Similarity Clusters for the Entities in PDB 1NQL

Entity #1 | Chains: A
epidermal growth factor receptor protein, length: 624 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26040
95 % 5 11 5178 Flexibility: High
Max RMSD: 25.7, Avg RMSD: 12.6
PDBFlex
90 % 5 11 5198
70 % 5 11 5075
50 % 5 11 4842
40 % 19 38 990
30 % 19 38 973
Entity #2 | Chains: B
epidermal growth factor protein, length: 53 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 10347
95 % 1 6 8389 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.7
PDBFlex
90 % 1 6 8334
70 % 1 6 8042
50 % 3 22 2346
40 % 3 22 2323
30 % 3 22 2212

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures