Sequence Similarity Clusters for the Entities in PDB 1NQL

Entity #1 | Chains: A
epidermal growth factor receptor protein, length: 624 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25687
95 % 5 10 5424 Flexibility: High
Max RMSD: 25.7, Avg RMSD: 12.6
PDBFlex
90 % 5 10 5449
70 % 5 10 5358
50 % 5 10 5105
40 % 19 37 1008
30 % 19 37 989
Entity #2 | Chains: B
epidermal growth factor protein, length: 53 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 10173
95 % 1 6 8262 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.7
PDBFlex
90 % 1 6 8210
70 % 1 6 7928
50 % 3 22 2311
40 % 3 22 2299
30 % 3 22 2188

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures