Sequence Similarity Clusters for the Entities in PDB 1NQL

Entity #1 | Chains: A
epidermal growth factor receptor protein, length: 624 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 10 6603
95 % 5 11 5256 Flexibility: High
Max RMSD: 25.7, Avg RMSD: 11.4
PDBFlex
90 % 5 11 5287
70 % 5 11 5445
50 % 5 11 5188
40 % 19 42 947
30 % 21 44 895
Entity #2 | Chains: B
epidermal growth factor protein, length: 53 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 10453
95 % 1 6 8447 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.1
PDBFlex
90 % 1 6 8378
70 % 1 6 8070
50 % 3 22 2371
40 % 3 22 2341
30 % 3 22 2195

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures