Sequence Similarity Clusters for the Entities in PDB 1NQG

Entity #1 | Chains: A
vitamin b12 receptor protein, length: 594 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 12337
95 % 11 12 6682 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 1.3
PDBFlex
90 % 11 12 6654
70 % 11 12 6468
50 % 11 12 6021
40 % 11 12 5493
30 % 11 12 4843

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2GUF 1 A Vitamin B12 transporter btuB 562
2 1NQE 1 A Vitamin B12 receptor 562
3 2GSK 1 A Vitamin B12 transporter btuB 562
4 3RGN 1 A Vitamin B12 transporter BtuB 562
5 3M8B 1 A Vitamin B12 transporter btuB 562
6 3M8D 1 A Vitamin B12 transporter btuB 562
7 3RGM 1 A Vitamin B12 transporter BtuB 562
8 1NQF 1 A Vitamin B12 receptor 562
9 1UJW 1 A Vitamin B12 receptor 562
10 1NQH 1 A VITAMIN B12 RECEPTOR 562
11 1NQG 1 A vitamin b12 receptor 562
12 2YSU 1 A Vitamin B12 transporter btuB 562