Sequence Similarity Clusters for the Entities in PDB 1NQ7

Entity #1 | Chains: A
NUCLEAR RECEPTOR ROR-BETA protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 25396
95 % 1 3 22415 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 3 21710
70 % 1 3 19855
50 % 1 78 394
40 % 1 78 421
30 % 27 1261 8
Entity #2 | Chains: B
STEROID RECEPTOR COACTIVATOR-1 protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures