Sequence Similarity Clusters for the Entities in PDB 1NQ7

Entity #1 | Chains: A
NUCLEAR RECEPTOR ROR-BETA protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 27661
95 % 1 3 23098 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 3 22409
70 % 1 3 20547
50 % 1 72 402
40 % 1 72 428
30 % 17 1006 10
Entity #2 | Chains: B
STEROID RECEPTOR COACTIVATOR-1 protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures