Sequence Similarity Clusters for the Entities in PDB 1NQ3

Entity #1 | Chains: A,B,C,D,E,F
14.3 kDa perchloric acid soluble protein protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 13986
95 % 1 1 13172 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 1 12950
70 % 3 3 3838
50 % 3 3 3735
40 % 20 31 498
30 % 22 36 355

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3M1X 1 A putative Endoribonuclease L-PSP 5759
2 1QU9 1 A, B, C YJGF PROTEIN 562
3 5V4D 1 A, B, C, D, E, F Putative translational inhibitor protein 632
4 2UYK 1 A, B, C PROTEIN TDCF 562 3.5.4 | Details
5 2UYN 1 A PROTEIN TDCF 562 3.5.4 | Details
6 2UYN 2 B, C PROTEIN TDCF 562 3.5.4 | Details
7 1QD9 1 A, B, C PURINE REGULATORY PROTEIN YABJ 1423
8 2CVL 1 A, B, C, D, E, F protein translation initiation inhibitor 274
9 2CW4 1 A translation initiation inhibitor 274
10 3MQW 1 A, B, C, D, E, F putative Endoribonuclease L-PSP 5759
11 3VCZ 1 A, B, C Endoribonuclease L-PSP 672
12 3QUW 1 A Protein MMF1 4932
13 1JD1 1 A, B, C, D, E, F HYPOTHETICAL 13.9 KDA PROTEIN IN FCY2-PET117 INTERGENIC REGION 4932
14 1QAH 1 A, B PERCHLORIC ACID SOLUBLE PROTEIN 10116
15 1X25 1 A, B Hypothetical UPF0076 protein ST0811 111955
16 3R0P 1 A, B, C, D, E, F L-PSP putative endoribonuclease 155900
17 5HP7 1 A Reactive Intermediate Deaminase A, chloroplastic UNP residues 68-187 3702 3.5.99.10 | Details
18 1ONI 1 A, B, C, D, E, F, G, H, I 14.5 kDa translational inhibitor protein Translational inhibitor 9606
19 3K0T 1 A, B, C Endoribonuclease L-PSP, putative 251701
20 1NQ3 1 A, B, C, D, E, F 14.3 kDa perchloric acid soluble protein 9925
21 1XRG 1 A, B, C Putative translation initiation inhibitor, yjgF family 1515
22 2UYJ 1 A, B, C PROTEIN TDCF 562 3.5.4 | Details
23 2UYP 1 A, B, C PROTEIN TDCF 562 3.5.4 | Details
24 2B33 1 A, B protein synthesis inhibitor, putative 2336
25 5HP8 1 A, B, C Reactive Intermediate Deaminase A, chloroplastic UNP residues 68-187 3702 3.5.99.10 | Details
26 3M4S 1 A, B, C, D, E, F putative Endoribonuclease L-PSP 5759
27 3L7Q 1 A, B, C, D, E, F, G, H, I Putative translation initiation inhibitor, aldR regulator-like protein 1309
28 2CSL 1 A, B, C, D, E, F protein translation initiation inhibitor 274
29 2DYY 1 A, B, C, D, E, F, G, H, I, J, K, L UPF0076 protein PH0854 53953
30 2CWJ 1 A putative endonuclease 56636 3.1 | Details
31 1J7H 1 A, B, C HYPOTHETICAL PROTEIN HI0719 727