Sequence Similarity Clusters for the Entities in PDB 1NQ2

Entity #1 | Chains: A
Thyroid hormone receptor beta-1 protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57781
95 % 9 18 2820 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 9 18 2867
70 % 16 27 1859
50 % 16 27 1889
40 % 16 27 1893
30 % 732 992 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.