Sequence Similarity Clusters for the Entities in PDB 1NQ1

Entity #1 | Chains: A
Thyroid hormone receptor beta-1 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57571
95 % 13 18 2801 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 13 18 2848
70 % 22 27 1850
50 % 22 27 1877
40 % 22 27 1881
30 % 939 989 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.