Sequence Similarity Clusters for the Entities in PDB 1NQ1

Entity #1 | Chains: A
Thyroid hormone receptor beta-1 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 15 3334
95 % 13 18 2903 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 13 18 2965
70 % 22 27 1955
50 % 22 27 1988
40 % 22 27 1969
30 % 1197 1261 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures