Sequence Similarity Clusters for the Entities in PDB 1NQ1

Entity #1 | Chains: A
Thyroid hormone receptor beta-1 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58381
95 % 13 18 2845 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 13 18 2888
70 % 22 27 1876
50 % 22 27 1912
40 % 22 27 1916
30 % 952 1004 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures