Sequence Similarity Clusters for the Entities in PDB 1NQ0

Entity #1 | Chains: A
Thyroid hormone receptor beta-1 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59464
95 % 8 18 2910 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 8 18 2956
70 % 15 27 1939
50 % 15 27 1965
40 % 15 27 1964
30 % 714 1019 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures