Sequence Similarity Clusters for the Entities in PDB 1NPZ

Entity #1 | Chains: A,B
Cathepsin S protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 27498
95 % 20 30 857 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 20 30 888
70 % 26 37 562
50 % 102 172 155
40 % 121 212 133
30 % 140 248 126

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.