Sequence Similarity Clusters for the Entities in PDB 1NPY

Entity #1 | Chains: A,B,C,D
Hypothetical shikimate 5-dehydrogenase-like protein HI0607 protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 19460
95 % 1 1 17173 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 1 1 16817
70 % 1 1 15642
50 % 1 1 13671
40 % 1 1 12240
30 % 18 49 485

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.