Sequence Similarity Clusters for the Entities in PDB 1NPX

Entity #1 | Chains: A
NADH PEROXIDASE protein, length: 447 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 14167
95 % 5 8 10384 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 5 8 10236
70 % 5 8 9701
50 % 5 8 8762
40 % 6 9 6354
30 % 66 164 138

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures