Sequence Similarity Clusters for the Entities in PDB 1NPU

Entity #1 | Chains: A
Programmed cell death protein 1 protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 42151
95 % 5 6 11246 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 5 6 11098
70 % 5 6 10476
50 % 6 15 2744
40 % 6 15 2664
30 % 6 15 2483

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures