Sequence Similarity Clusters for the Entities in PDB 1NPU

Entity #1 | Chains: A
Programmed cell death protein 1 protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 46348
95 % 5 6 10818 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 5 6 10667
70 % 5 6 10128
50 % 6 15 2606
40 % 6 15 2556
30 % 6 15 2421

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures