Sequence Similarity Clusters for the Entities in PDB 1NPP

Entity #1 | Chains: A,B,C,D
Transcription antitermination protein nusG protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 6175
95 % 3 4 6765 Flexibility: Medium
Max RMSD: 16.6, Avg RMSD: 6.2
PDBFlex
90 % 3 4 6745
70 % 3 4 6561
50 % 3 4 6092
40 % 3 4 5683
30 % 3 4 5095

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.