Sequence Similarity Clusters for the Entities in PDB 1NPO

Entity #1 | Chains: A
NEUROPHYSIN II protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 9825
95 % 3 5 8053 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 3 5 8005
70 % 3 9 4831
50 % 3 9 4629
40 % 3 9 4397
30 % 3 9 4038
Entity #2 | Chains: B,D
OXYTOCIN protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
NEUROPHYSIN II protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 70189
95 % 4 5 8053 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 4 5 8005
70 % 4 9 4831
50 % 4 9 4629
40 % 4 9 4397
30 % 4 9 4038

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.