Sequence Similarity Clusters for the Entities in PDB 1NPL

Entity #1 | Chains: A
PROTEIN (AGGLUTININ) protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 29772
95 % 2 2 24665 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 2 23855
70 % 2 5 7185
50 % 4 20 1340
40 % 8 34 687
30 % 9 38 583

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures