Sequence Similarity Clusters for the Entities in PDB 1NPL

Entity #1 | Chains: A
PROTEIN (AGGLUTININ) protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 28353
95 % 2 2 23499 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 2 22756
70 % 2 5 6820
50 % 4 20 1278
40 % 8 34 652
30 % 9 38 558

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.