Sequence Similarity Clusters for the Entities in PDB 1NPJ

Entity #1 | Chains: A,B,C
Copper-containing nitrite reductase protein, length: 343 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 6125
95 % 34 47 302 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.3
PDBFlex
90 % 34 47 312
70 % 96 132 157
50 % 101 140 184
40 % 101 140 195
30 % 121 163 188

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures