Sequence Similarity Clusters for the Entities in PDB 1NPE

Entity #1 | Chains: A
nidogen protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57399
95 % 1 1 40827
90 % 1 1 39004
70 % 1 1 34619
50 % 1 1 29552
40 % 1 1 26080
30 % 1 1 22139
Entity #2 | Chains: B
Laminin gamma-1 chain protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 43296
95 % 2 2 32730
90 % 2 2 31302
70 % 2 2 27926
50 % 2 2 23825
40 % 2 2 20964
30 % 2 2 17760

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.