Sequence Similarity Clusters for the Entities in PDB 1NPC

Entity #1 | Chains: A
NEUTRAL PROTEASE protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57349
95 % 1 2 29289 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 2 28262
70 % 140 182 242
50 % 142 184 254
40 % 143 185 266
30 % 149 193 264

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures