Sequence Similarity Clusters for the Entities in PDB 1NPA

Entity #1 | Chains: A,B
POL polyprotein protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 243 351 5
95 % 280 410 4 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 455 658 3
70 % 472 682 5
50 % 480 708 5
40 % 490 718 8
30 % 492 720 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures