Sequence Similarity Clusters for the Entities in PDB 1NP8

Entity #1 | Chains: A,B
Calcium-dependent protease, small subunit protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32378
95 % 1 1 28056 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 26969
70 % 1 1 24313
50 % 1 1 20845
40 % 1 1 18378
30 % 1 1 18052

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures