Sequence Similarity Clusters for the Entities in PDB 1NOW

Entity #1 | Chains: A,B
beta-hexosaminidase beta chain protein, length: 507 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 3151
95 % 1 6 3688 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 1 6 3742
70 % 1 6 3690
50 % 1 7 2878
40 % 1 7 2830
30 % 1 7 2649

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures