Sequence Similarity Clusters for the Entities in PDB 1NOW

Entity #1 | Chains: A,B
beta-hexosaminidase beta chain protein, length: 507 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 3052
95 % 1 6 3597 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 1 6 3648
70 % 1 6 3591
50 % 1 7 2809
40 % 1 7 2765
30 % 1 7 2585

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.