Sequence Similarity Clusters for the Entities in PDB 1NOJ

Entity #1 | Chains: A
GLYCOGEN PHOSPHORYLASE protein, length: 842 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 11141
95 % 127 195 138 Flexibility: Low
Max RMSD: 5.0, Avg RMSD: 1.3
PDBFlex
90 % 127 195 146
70 % 132 215 144
50 % 132 215 178
40 % 141 232 164
30 % 141 232 178

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures