Sequence Similarity Clusters for the Entities in PDB 1NO9

Entity #1 | Chains: L
Alpha Thrombin protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 143 335 45
95 % 143 336 61 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 143 336 66
70 % 143 338 78
50 % 143 338 107
40 % 143 338 131
30 % 143 338 136
Entity #2 | Chains: H
Alpha Thrombin protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 126 290 57
95 % 150 374 35 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.6
PDBFlex
90 % 150 381 39
70 % 150 405 46
50 % 150 405 84
40 % 884 1698 4
30 % 938 1848 6
Entity #3 | Chains: I
hirugen protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures