Sequence Similarity Clusters for the Entities in PDB 1NO9

Entity #1 | Chains: L
Alpha Thrombin protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 140 333 44
95 % 140 334 60 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 140 334 64
70 % 140 336 77
50 % 140 336 100
40 % 140 336 123
30 % 140 336 134
Entity #2 | Chains: H
Alpha Thrombin protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 123 288 55
95 % 147 372 36 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.6
PDBFlex
90 % 147 379 38
70 % 147 403 45
50 % 147 403 78
40 % 873 1674 4
30 % 927 1822 6
Entity #3 | Chains: I
hirugen protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.