Sequence Similarity Clusters for the Entities in PDB 1NO9

Entity #1 | Chains: L
Alpha Thrombin protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 145 338 45
95 % 145 339 64 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 145 339 67
70 % 145 341 78
50 % 145 341 107
40 % 145 341 131
30 % 145 341 138
Entity #2 | Chains: H
Alpha Thrombin protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 125 290 58
95 % 152 377 36 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.6
PDBFlex
90 % 152 384 39
70 % 152 408 46
50 % 152 408 84
40 % 901 1720 4
30 % 955 1870 6
Entity #3 | Chains: I
hirugen protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures