Sequence Similarity Clusters for the Entities in PDB 1NNY

Entity #1 | Chains: A
Protein-tyrosine phosphatase, non-receptor type 1 protein, length: 321 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 83 94 303
95 % 127 145 247 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 0.9
PDBFlex
90 % 127 145 255
70 % 127 145 286
50 % 127 146 327
40 % 127 146 358
30 % 222 261 171

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures