Sequence Similarity Clusters for the Entities in PDB 1NNI

Entity #1 | Chains: 1
hypothetical protein yhda protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 4952
95 % 3 5 2492 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 3 5 2569
70 % 3 5 2553
50 % 3 5 2544
40 % 3 5 2453
30 % 3 5 2298

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures