Sequence Similarity Clusters for the Entities in PDB 1NNI

Entity #1 | Chains: 1
hypothetical protein yhda protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15024
95 % 3 5 2258 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 3 5 2325
70 % 3 5 2318
50 % 3 5 2305
40 % 3 5 2290
30 % 3 5 2199

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.