Sequence Similarity Clusters for the Entities in PDB 1NNI

Entity #1 | Chains: 1
hypothetical protein yhda protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15892
95 % 3 5 2410 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 3 5 2478
70 % 3 5 2478
50 % 3 5 2465
40 % 3 5 2435
30 % 3 5 2321

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures