Sequence Similarity Clusters for the Entities in PDB 1NNI

Entity #1 | Chains: 1
hypothetical protein yhda protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16166
95 % 3 5 2448 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 3 5 2513
70 % 3 5 2516
50 % 3 5 2500
40 % 3 5 2465
30 % 3 5 2351

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures